Bam-Readcount¶

Description¶

The purpose of this program is to generate metrics at single nucleotide positions. There are number of metrics generated which can be useful for filtering out false positive calls.

Environment Modules¶

Run module spider bam-readcount to find out what environment modules are available for this application.

Environment Variables¶

HPC_BAM_READCOUNT_DIR - installation directory
HPC_BAM_READCOUNT_BIN - executable directory

Categories¶

biology, genomics