ASHS

Description

ashs website

ASHS is a software package for automatic segmentation of hippocampal subfields in MRI scans. ASHS requires a T1-weighted scan and an oblique coronal T2-weighted scan with high in-plane resolution. ASHS will automatically label main hippocampal subfields and medial temporal lobe subregions. ASHS is easy to train for other brain segmentation applications as well. * ASHS_ROOT - installation directory

Environment Modules

Run module spider ashs to find out what environment modules are available for this application.

Environment Variables

• HPC_ASHS_DIR - installation directory
• HPC_ASHS_BIN - executable directory
• HPC_ASHS_CONF - default configuration file
• HPC_ASHS_ATLAS - atlases directory

Categories

biology, imaging