artemis¶
Description¶
The Artemis Software is a set of software tools for genome browsing and annotation.
Environment Modules¶
Run module spider artemis to find out what environment modules are available for this application.
Environment Variables¶
- HPC_ARTEMIS_DIR - installation directory
- HPC_ARTEMIS_BIN - executable directory
Citation¶
If you publish research that uses artemis you have to cite it as follows:
Carver, T., Harris, S. R., Berriman, M., Parkhill, J., & McQuillan, J. A. (2012). Artemis: An integrated platform for visualization and analysis of high-throughput sequence-based experimental data. Bioinformatics, 28(4), 464–469. https://doi.org/10.1093/bioinformatics/btr703
Carver, T., Berriman, M., Tivey, A., Patel, C., Böhme, U., Barrell, B. G., Parkhill, J., & Rajandream, M.-A. (2008). Artemis and ACT: Viewing, annotating and comparing sequences stored in a relational database. Bioinformatics, 24(23), 2672–2676. https://doi.org/10.1093/bioinformatics/btn529
Berriman, M., & Rutherford, K. (2003). Viewing and annotating sequence data with Artemis. Briefings in Bioinformatics, 4(2), 124–132. https://doi.org/10.1093/bib/4.2.124
Rutherford, K., Parkhill, J., Crook, J., Horsnell, T., Rice, P., Rajandream, M.-A., & Barrell, B. (2000). Artemis: Sequence visualization and annotation. Bioinformatics, 16(10), 944–945. https://doi.org/10.1093/bioinformatics/16.10.944
Categories¶
biology